Authors : Sudeep Nagaraj, Praveen Kumar Kondenahalli Subbarayappa, Ragunandana Girenahalli, Jagadish Tavarekere Venkataravanappa, Nithya Masthenahalli Narayanaswamy
Volume/Issue : Volume 5 - 2020, Issue 1 - January
Google Scholar : https://goo.gl/DF9R4u
Scribd : https://bit.ly/2GSQCtS
To evaluate the standardized short regions of
the genome of plant or animal species DNA barcoding
technique was developed. This method is very useful to
identify novel genes of known species. In online
numerous sequence, databases are stored world-wide.
To identify the species this is one of the methods used
and it saves cost and time by omitting the sequencing
step. The use of available barcode data to design
optimized primers for further analysis, such as high-
resolution melting analysis (HRM).This study identified
the species that share similar external morphological
features, using hybrid method Bar-HRM rather than
conduct traditional taxonomic identification that
requires major parts leaf, flower, the fruit of the
specimens. Primer pairs derived from chloroplast
regions (ITS1, ITS2, and rbcl) were used in the Bar-
HRM. The method developed here was proven to be
effective in distinguishing between the identification of
different species in Piperaceae family plants. The
extracted DNA from tested samples yielded a specific
amplification product with the ITS1, ITS2 and rbcl
primer. ITS1 region is proved to be the most promising
universal DNA barcode for the plant family of
Piperaceae.
Keywords : Piperaceae; Bar-HRM; rbcL; ITS2; ITS1; DNA Barcoding.